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Export Preview

From this page, users are able to:

  • Review all the somatic and germline variants that have been marked as 'ready for export'
  • Review all the past comments and classifications that have been added to each variant
  • Export the listed variants to a PDF document

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# Section Description
1 Somatic small variants Shows all the relevant information and annotations about the somatic small variant(s) that have been added for export
2 Somatic structural and copy number variants Shows all the relevant information and annotations about the somatic structural and copy number variant(s) that have been added for export
3 Germline small variants Shows all the relevant information and annotations about the somatic structural and copy number variant(s) that have been added for export.
4 Interpretation history Shows a history of all the comments and classifications that have been recorded to the specific variant
5 Export to PDF Click to generate a downloadable PDF that contains all the variants on the export preview list page

Adding Variants

By default, no variants will be shown in the export preview page, to add a variant:

  1. Go to any of the variant list pages
  2. Click the flag icon of the variant you want to add for export
  3. The variant with comments and classifications will be shown on the export preview page

Info

To add comments or classifications, you will have to navigate back to the variant list or details page. Only 50 variants can be selected for export, a blue message will appear at the bottom of the variant list or details page when you have reached the limit.

Removing Variants

To remove a variant from the export preview page:

  1. Go back to any of the variant list or details pages
  2. Click the green flag icon of the variant you want to remove from export
  3. The variant with comments and classifications will be removed from the export preview page

Page errors

When variant data fails to load, you will see a full page error. If reloading the page doesn't resolve the problem, get in touch with support via the Genomics England Service Desk.

Last update: 2023-09-25